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Alnus glutinosa is one of only three lineages within the order Fagales capable of establishing root nodule symbiosis (RNS). Although a fragmented genome assembly of A. glutinosa was previously available, its limited quality, combined with …
Read PDF<i>Candida parapsilosis</i> is a major pathogen causing central venous catheter-associated bloodstream infections with biofilm formation as virulence factor. We sequenced the genomes of six <i>C. parapsilosis</i> isolates from bloodstream infections displaying no, low, and high …
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Read PDFWe report draft genome sequences of 12 <i>Agrobacterium</i> strains isolated from coastal plants in Taiwan. Assemblies range from 4.95 to 5.42 Mb with >97.5% completeness. Genomic analyses reveal species identities and secretion system genes, providing …
Read PDFAs a cornerstone of the global chocolate industry, cacao cultivation supports millions of livelihoods. The modern hybrid variety CCN51 is the most widely planted cultivar in Latin America, valued for its exceptional yield, broad disease …
Read PDFWe present a genome assembly from a specimen of <i>Agelastica alni</i> (Alder leaf beetle; Arthropoda; Insecta; Coleoptera; Chrysomelidae). The genome sequence has a total length of 692.27 megabases. Most of the assembly (98.71%) is scaffolded …
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Read PDF<h4>Summary</h4>Bioinformatics is a rapidly evolving field with numerous specialized tools developed for essential genomic analysis tasks, such as read simulation, mapping, and variant calling. However, managing these tools presents significant challenges due to varied dependencies, …
Read PDFWe present a genome assembly from a female specimen of <i>Podarcis melisellensis</i> (Dalmatian wall lizard; Chordata; Lepidosauria; Squamata; Lacertidae). The assembly contains two haplotypes with total lengths of 1,574.91 megabases and 1,437.04 megabases. Most of …
Read PDFWe present a genome assembly from an individual <i>Spongilla lacustris</i> (freshwater sponge; Porifera; Demospongiae; Spongillida; Spongillidae). The genome sequence is 248.7 megabases in span. Most of the assembly is scaffolded into 23 chromosomal pseudomolecules. The …
Read PDFBrucellosis is a globally prevalent zoonotic disease caused by <i>Brucella</i> species, posing a significant threat to both public health and the livestock industry. Despite ongoing research efforts, the mechanisms underlying <i>Brucella</i> pathogenesis remain poorly understood, …
Read PDFWe present a genome assembly from a female <i>Philonthus spinipes</i> (rove beetle; Arthropoda; Insecta; Coleoptera; Staphylinidae). The genome sequence has a total length of 671.10 megabases. Most of the assembly is scaffolded into 25 chromosomal …
Read PDFWe present a genome assembly from a male <i>Bucephala clangula</i> (Common Goldeneye; Chordata; Aves; Anseriformes; Anatidae). The genome sequence has a total length of 1,190.92 megabases. Most of the assembly (95.05%) is scaffolded into 40 …
Read PDFWe present a genome assembly from a female specimen of <i>Tiliacea citrago</i> (Orange Sallow; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence has a total length of 800.96 megabases. Most of the assembly (98.57%) is scaffolded …
Read PDFThis study reports the draft genome sequence of <i>Pseudomonas</i> sp. MAHUQ-62, a bacterial strain isolated from the soil sample of a pumpkin garden located in Anseong, South Korea, in 2020. The genome consists of 6,038,011 …
Read PDFRheum tanguticum is renowned for its medicinal properties, including purgative, anti-inflammatory and hepatoprotective effects, primarily attributed to anthraquinones (AQs). However, the molecular mechanisms of AQs biosynthesis have largely been hindered by insufficient genomic resources and …
Read PDFWe present a genome assembly from a male specimen of <i>Ornithomya chloropus</i> (Grouse Louse Fly; Arthropoda; Insecta; Diptera; Hippoboscidae). The genome sequence has a total length of 193.17 megabases. Most of the assembly (99.94%) is …
Read PDFWe present a genome assembly from a female specimen of <i>Podarcis erhardii</i> (Erhard's wall lizard; Chordata; Lepidosauria; Squamata; Lacertidae). The assembly contains two haplotypes with total lengths of 1,495.98 megabases and 1,477.75 megabases. Most of …
Read PDFBACKGROUND: The maize inbred line Chang7-2 and derived lines are important male donors for hybrid production, contributing significantly to the development of high-yield and stress-tolerant hybrids. Additionally, Chang7-2 serves as a valuable model inbred line …
Read PDF<i>Myxococcus xanthus</i> DZ2, a model myxobacterium, has three reported genome assemblies, including two recent complete assemblies (MxDZ2_Tam and MxDZ2_Nan) from the same culture stock. These assemblies misreported their circular nature and differed by 6.4 kb, …
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