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We present a genome assembly from a male specimen of <i>Leptodirus hochenwartii</i> (cave beetle; Arthropoda; Insecta; Coleoptera; Leiodidae). The genome sequence has a total length of 492.36 megabases. Most of the assembly (98.03%) is scaffolded …
Read PDFHere, we present whole genome sequencing (WGS) data of clinical <i>Klebsiella pneumoniae</i> and <i>K. quasipneumoniae</i> isolates obtained from urine samples collected between October 2024 and January 2025 from patients in hospitals in Baghdad, Iraq. A …
Read PDFWe present a genome assembly from a female specimen of <i>Pyrrhia umbra</i> (Bordered Sallow; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence has a total length of 433.58 megabases. Most of the assembly (99.99%) is scaffolded …
Read PDFWe present a genome assembly from an individual female <i>Luffia ferchaultella</i> (the Virgin Bagworm; Arthropoda; Insecta; Lepidoptera; Psychidae). The genome sequence spans 645.30 megabases. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including …
Read PDFAssembling individual genomes remains an expensive endeavor, hindering large-scale comparative human genomics. So far, chromosome-level assemblies of only a few individuals, including PR1 (Puerto Rican), Ash1 (Ashkenazi Jew), Han1 (Southern Han Chinese), and CHM13 (Northern …
Read PDF<h4>Summary</h4>Viral genome sequencing and analysis are crucial for understanding the diversity and evolution of viruses. Traditional Sanger sequencing is limited by low sequence depth and is labor intensive. Next-Generation Sequencing (NGS) methods, such as Illumina, …
Read PDFWe present a genome assembly from a female specimen of <i>Cylindroiulus punctatus</i> (club-tailed millipede; Arthropoda; Diplopoda; Julida; Julidae). The genome sequence has a total length of 354.09 megabases. Most of the assembly (92.9%) is scaffolded …
Read PDFDracocephalum rupestre Hance is China's traditional herbal medicine in the family Labiatae with numerous health benefits, including anti-inflammatory, antiviral and anti-tumor activities. However, the genus Dracocephalum has no reference genome currently, which restricts the research …
Read PDFWe present a genome assembly from a female specimen of <i>Tipula lateralis</i> (cranefly; Arthropoda; Insecta; Diptera; Tipulidae). The genome sequence has a total length of 701.32 megabases. Most of the assembly (89.15%) is scaffolded into …
Read PDFWe present a genome assembly from a female specimen of <i>Chloroclystis v-ata</i> (V-Pug; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence has a total length of 275.35 megabases. Most of the assembly (99.95%) is scaffolded into …
Read PDFBACKGROUND: Marine-derived fungi are prolific producers of structurally diverse secondary metabolites with significant pharmaceutical potential. The discovery of natural products has been unprecedentedly accelerated by the prediction of biosynthetic gene clusters (BGCs) within the whole-genome …
Read PDFThe Y chromosome evolves rapidly, often differing dramatically even between closely related species. While such divergence has long been suspected to contribute to hybrid male sterility, leading to reproductive isolation and thus speciation, the underlying …
Read PDFThe filarioid nematode <i>Dirofilaria immitis</i> is the causative agent of heartworm disease, a major parasitic infection of canids, felids and occasionally humans. Current prevention relies on macrocyclic lactone-based chemoprophylaxis, but the emergence of drug resistance …
Read PDFThe wild apple, Malus fusca accession MAL0045, is highly resistant to fire blight disease, caused by the bacterial pathogen, Erwinia amylovora. A major resistance locus, FB_Mfu10 was identified on chromosome 10 of MAL0045 including other …
Read PDFCoral reefs are among the most biodiverse and economically significant ecosystems globally, yet they are increasingly degrading due to global climate change and local human activities. The sun coral Tubastraea coccinea (T. coccinea) an obligate …
Read PDF<h4>Motivation</h4>Large sequencing datasets are being produced and deposited into public archives at unprecedented rates. The availability of tools that can reliably and efficiently generate and store sequencing read summary statistics has become critical.<h4>Results</h4>As part of …
Read PDFWe present a genome assembly from a female <i>Spermophilus citellus</i> (European ground squirrel; Chordata; Mammalia; Rodentia; Sciuridae). The genome sequence has a total length of 3,090.03 megabases. Most of the assembly (95.47%) is scaffolded into …
Read PDFWe present a genome assembly from a female <i>Eupithecia inturbata</i> (Maple Pug; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence has a total length of 427.76 megabases. Most of the assembly (99.94%) is scaffolded into 31 …
Read PDFThe dynamic organization of chromatin governs gene expression by regulating DNA accessibility. In plants, light not only initiates photomorphogenesis but also reshapes higher-order chromatin architecture. However, the limited resolution of current techniques impedes investigation of …
Read PDFThe genus Skeletonema stands out as one of the most prevalent and globally distributed diatoms within coastal marine ecosystems. Additionally, it holds significance as a pivotal organism across diverse research domains, encompassing biochemistry, ecophysiology, molecular …
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