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We present a haploid genome assembly from an individual male <i>Ischnus inquisitorius</i> (ichneunomid wasp; Arthropoda; Insecta; Hymenoptera; Ichneumonidae). The genome sequence has a total length of 232.18 megabases. Most of the assembly (99.81%) is scaffolded …
Read PDFThe Genome Warehouse (GWH), accessible at https://ngdc.cncb.ac.cn/gwh, is an extensively-utilized public repository dedicated to the deposition, management, and sharing of genome assembly sequences, annotations, and metadata. This paper highlights noteworthy enhancements to the GWH since …
Read PDFGynostemma pentaphyllum, a herb used in tea and traditional Chinese medicine, shows geographic variation in its production of valuable dammarane-type ginsenosides and gypenoside LVI between populations from Suining (SN) and Nanning (NN). To elucidate the …
Read PDF<h4>Motivation</h4>Locality-Sensitive Hashing (LSH) is a widely used algorithm for estimating similarity between large datasets in bioinformatics, with applications in genome assembly, sequence alignment, and metagenomics. However, traditional single-metric LSH approaches often lead to inefficiencies, particularly …
Read PDF<h4>Motivation</h4>De novo assembly creates reference genomes that underpin many modern biodiversity and conservation studies. Large numbers of new genomes are being assembled by labs around the world. To avoid duplication of efforts and variable data …
Read PDFXylocopinae, a diverse bee subfamily comprising over 1,000 bee species, and also a major model system for studying the pollination and evolution of sociality. The lack of chromosome-level genome assembly resources for the Xylocopinae limits …
Read PDFWe present a genome assembly from an individual female <i>Acleris ferrugana</i> (Tawny Oak Tortrix; Arthropoda; Insecta; Lepidoptera; Tortricidae). The genome sequence has a total length of 480.03 megabases. Most of the assembly (99.03%) is scaffolded …
Read PDFMutations that arise in the shoot apical meristems can become fixed, but typically only in one of the meristem layers. Therefore, in long-lived, clonally propagated species, polymorphic genomes coexist in the form of periclinal chimeras. …
Read PDFWe present a genome assembly from an individual male <i>Melieria picta</i> (picture-winged fly; Arthropoda; Insecta; Diptera; Ulidiidae). The assembly contains two haplotypes with total lengths of 423.82 megabases and 429.48 megabases. Most of haplotype 1 …
Read PDFWe present a genome assembly from an adult female <i>Choneiulus palmatus</i> (Millipede; Arthropoda; Diplopoda; Julida; Blaniulidae). The genome sequence has a total length of 626.52 megabases. Most of the assembly (92.77%) is scaffolded into 14 …
Read PDFWe present a genome assembly from a male specimen of <i>Panolis flammea</i> (Pine Beauty; Arthropoda; Insecta; Lepidoptera; Noctuidae). The assembly contains two haplotypes with total lengths of 709.26 megabases and 713.60 megabases. Most of haplotype …
Read PDFWe present a genome assembly from an individual male <i>Athene noctua</i> (Little Owl; Chordata; Aves; Strigiformes; Strigidae). The assembly contains two haplotypes with total lengths of 1 355.86 megabases and 1 302.38 megabases. Most of …
Read PDFWe present a genome assembly from a female <i>Commophila aeneana</i> (Orange Beauty; Arthropoda; Insecta; Lepidoptera; Tortricidae). The assembly consists of two haplotypes with total lengths of 429.47 megabases and 322.66 megabases. Most of haplotype 1 …
Read PDFWe describe a rapidly growing mycobacterial (RGM) species closely related to <i>Mycobacterium wolinskyi</i>. The bacterium was isolated from three biopsies obtained from a 78-year-old Venezuelan woman who presented with a chronic superficial erythematous plaque in …
Read PDFWe present a genome assembly from an individual male <i>Prionychus ater</i> (comb-clawed beetle; Arthropoda; Insecta; Coleoptera; Tenebrionidae). The assembly contains two haplotypes with total lengths of 385.22 megabases and 347.54 megabases. Most of haplotype 1 …
Read PDFWe present a genome assembly from a female specimen of <i>Danio aesculapii</i> (the Panther Danio; Chordata; Actinopteri; Cypriniformes; Cyprinidae). The genome sequence is 1,381.5 megabases in span. Most of the assembly is scaffolded into 25 …
Read PDFThe main genetic diversity observed in cultivated citrus results from a reticulate evolution involving four ancestral taxa whose radiation occurred in allopatry. In such context, GWAS analysis, genome diversity and transcriptomic studies will be significantly …
Read PDFWe present a genome assembly from an individual female <i>Platalea leucorodia</i> (Eurasian Spoonbill; Chordata; Aves; Pelecaniformes; Threskiornithidae). The assembly contains two haplotypes with total lengths of 1 345.83 megabases and 1 190.44 megabases. Most of …
Read PDF<i>Pediococcus pentosaceus</i> was isolated from a Holstein Friesian dairy cattle from a conventionally operated farm. The complete genome of strain <i>P. pentosaceus</i> 13.7 2A-1 comprises 1.84 Mbp and 1,746 protein-coding sequences. The decoded genome sequence …
Read PDFWe present a genome assembly from a female specimen of <i>Zygaena carniolica</i> (Crepuscular Burnet; Arthropoda; Insecta; Lepidoptera; Zygaenidae). The assembly contains two haplotypes with total lengths of 353.39 megabases and 323.68 megabases. Most of haplotype …
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