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Flemingia macrophylla, a perennial shrub of the family Fabaceae, possesses pharmacological properties such as anti-inflammatory and antibacterial activities. However, its whole genome has remained largely unexplored. In this study, we generated a chromosome-level genome assembly …
Read PDFThe tea tussock moth, Euproctis pseudoconspersa, is one of the most notorious tea plant pests globally. Herein, we assembled a high-quality chromosome level genome of E. pseudoconspersa using a combination of PacBio HiFi sequencing and …
Read PDF'Huizao' is a leading jujube (Ziziphus jujuba Mill.) variety valued for its high-quality dry fruit. Using PacBio HiFi long reads and Hi-C data, we generated a high-quality, chromosome-level, haplotype-resolved genome assembly for this cultivar, with …
Read PDFSiniperca obscura is an economically valuable and ecologically significant species in China, yet the lack of comprehensive genomic resources has hindered genetic studies and breeding efforts. In this study, we present a high-quality, chromosome-level genome …
Read PDFThe mulberry thrips, Pseudodendrothrips mori Niwa, is a significant agricultural pest whose genomic study has been hindered by a lack of reference data. Here, we present the first high-quality, chromosome-level genome assembly for this pest. …
Read PDFGonorynchus abbreviatus (bighead beaked sandfish), is a demersal fish inhabiting the deep waters of the Northwest Pacific for which genomic resource have been limited. Here, we assembled a chromosome-level genome using DNBSEQ, PacBio, and Hi-C …
Read PDFNotwithstanding the ecological significance of the Cladosporium genus, which includes several cosmopolitan fungi reported as saprobes, plant pathogens, and causes of allergic and cutaneous diseases in humans, only 41 genomes have been reported. Here, we …
Read PDFPrimula kwangtungensis, a perennial herbaceous plant endemic to the Nanling Mountains in southern China, is rare and sparsely distributed, making it a conservation priority. This study reports a high-quality chromosome-level genome assembly of approximately 1.29 …
Read PDFWe report the first chromosome-level genome assembly of the critically endangered dwarf cattail, Typha minima, a wetland species of ecological and medicinal importance. Utilizing PacBio HiFi long-read sequencing and Hi-C scaffolding technologies, we generated a …
Read PDFWe present a genome assembly from an individual male <i>Triaenodes bicolor</i> (Bicolour Sedge; Arthropoda; Insecta; Trichoptera; Leptoceridae). The assembly contains two haplotypes with total lengths of 615.75 megabases and 613.86 megabases. Most of haplotype 1 …
Read PDFThe reed vole (Microtus fortis) is an important rodent model for studying unique biological traits, such as its natural resistance to Schistosoma japonicum. To facilitate the genetic study of these phenotypes, we have produced the …
Read PDFBambusa tulda Roxb., a member of the Bambusoideae subfamily, is an ecologically and commercially important plant resource widely distributed in the Indian subcontinent. Our study reports long-read PacBio HiFi sequencing and genome assembly of B. …
Read PDFWe present a genome assembly from a specimen of <i>Phakellia ventilabrum</i> (Porifera; Demospongiae; Bubarida; Bubaridae). The genome sequence has a total length of 211.92 megabases. Most of the assembly (99.97%) is scaffolded into 25 chromosomal …
Read PDFWe present a genome assembly from an individual <i>Aurelia</i> sp. 4 Dawson <i>et al</i>., 2005 (moon jellyfish; Cnidaria; Scyphozoa; Semaeostomeae; Ulmaridae). The genome sequence has a total length of 462.10 megabases. Most of the assembly …
Read PDFWhole-genome duplication is a major evolutionary force, with salmonids providing a key model system. In this study, we generated a high-quality masu salmon genome using PacBio HiFi, ONT ultra-long and Hi-C sequencing technologies. The final …
Read PDFAgaricogonopus acrotrifoliolatus (Diplopoda: Spirostreptida) is the largest millipede species from China. Morphologically, it is characterized by a pair of prominent, fungiform gonopodal processes. Despite the ecological importance of Spirostreptida millipedes as key decomposers in soil …
Read PDFWe present a genome assembly from an individual female <i>Rhinolophus hipposideros</i> (Lesser Horseshoe Bat; Chordata; Mammalia; Chiroptera; Rhinolophidae). The assembly contains two haplotypes with total lengths of 2 171.31 megabases and 2 240.90 megabases. Most …
Read PDFWe present a high-quality chromosome-scale genome assembly for the Orange Baboon Tarantula (Pterinochilus murinus). The 4.7 Gb genome is organized into 22 chromosomes and demonstrates 96.32% completeness based on BUSCO analysis (-m genome) using the …
Read PDF<h4>Key message</h4>Using PacBio and Hi-C technologies, we generated a chromosome-level whole-genome assembly of Carex rigescens and established its genetic transformation system, which provides novel insights into the research of this species. Carex rigescens is an …
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