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Full text 2025

The genome sequence of the Marsh Pennywort, <i>Hydrocotyle vulgaris</i> L. (Apiales: Araliaceae)

Ruhsam M, Hollingsworth PM, Royal Botanic Garden Edinburgh Genome Acquisition Lab, et al.

We present a genome assembly from a specimen of <i>Hydrocotyle vulgaris</i> (Marsh Pennywort; Streptophyta; Magnoliopsida; Apiales; Araliaceae). The assembly contains two haplotypes with total lengths of 870.40 megabases and 862.86 megabases. Most of haplotype 1 …

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Genome Assembly
Full text 2025

The impact of telomere-to-telomere genome assembly in the plant pan-genomics era

Aoyagi Blue Y, Iimura H, Sato MP, et al.

Advances in sequencing technologies have enabled the determination of genome sequences of multiple lines within a single species. Comparative analysis of multiple genome sequences reveals all genes present within a species, providing insight into the …

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Bioinformatics Genome Assembly Nanopore Sequencing
Full text 2025

The chromosomal genome sequence of the kidney sponge, &lt;i&gt;Chondrosia reniformis&lt;/i&gt; Nardo, 1847, and its associated microbial metagenome sequences

Pita L, Maldonado M, Koutsouveli V, et al.

We present a genome assembly from a specimen of <i>Chondrosia reniformis</i> (kidney sponge; Porifera; Demospongiae; Chondrillida; Chondrillidae). The genome sequence has a total length of 117.37 megabases. Most of the assembly (99.98%) is scaffolded into …

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Genome Assembly Metagenomics
Full text 2025

Chromosome-level genome assembly of Triplophysa scleroptera

Feng X, Zhu R, Jia Y, et al.

Triplophysa scleroptera is an endemic fish species in Qinghai Lake and the upper reaches of the Yellow River. However, studies on conservation and evolutionary genetics were seriously impeded by the absence of a reference genome. …

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Genome Assembly