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2701 results

Full text 2026

Recent advances in omics-based research of mitral valve disease

Jin S, Wu S, Zhang D, et al.

Mitral valve disease (MVD), particularly mitral valve prolapse (MVP), is a common heart valve condition affecting millions of people worldwide. Its pathological mechanism is complex, involving multiple factors such as extracellular matrix remodeling, inflammatory responses, …

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Epigenetics Transcriptomics
Full text 2026

Network Pharmacology and Single-Cell Transcriptomic Investigation of Molecular Mechanisms Underlying <i>Erigeron breviscapus</i> Treatment in Acute Myocardial Infarction

Yan L, Cao J, Xie Q, et al.

<h4>Background</h4>Acute myocardial infarction (AMI) represents a life-threatening cardiovascular emergency characterized by myocardial necrosis resulting from prolonged ischemia. <i>Erigeron breviscapus</i> (Vant.) Hand.-Mazz. (EB), a traditional Chinese medicinal herb, has demonstrated cardioprotective properties in clinical applications. This …

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Transcriptomics
Full text 2026

circVDJ-seq for T cell clonotype detection in single-cell and spatial multi-omics

Plumbom I, Obermayer B, Raspe R, et al.

Monitoring T cell repertoires in human tissues provides important insights into immune response mechanisms in cancer, infectious diseases, and autoimmunity. However, retrieving VDJ information from single-cell and spatial transcriptomics workflows with 3'-barcoding of cDNA remains …

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Transcriptomics
Full text 2026

Chromosome-level genome assembly and population genomics unveil strigolactone-regulated growth adaptation in the mycoheterotrophic orchid &lt;i&gt;Gastrodia elata&lt;/i&gt;

Hua Z, Li L, Chen Y, et al.

Mycoheterotrophic plants rely entirely on fungal symbionts for nutrients, yet the role of intraspecific genomic variation in shaping symbiotic adaptation remains unclear. <i>Gastrodia elata</i> is a mycoheterotrophic orchid with multiple cultivated varieties. Here, we generated …

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Bioinformatics Genome Assembly Transcriptomics
Full text 2026

Single-cell transcriptomic and chromatin accessibility atlas of peripheral blood mononuclear cells reveals immune cell heterogeneity and breed-specific characteristics in Duroc and Meishan pigs

Fan H, Du C, Xu C, et al.

BACKGROUND: Pig is an important model for biomedical studies, yet the immune cell heterogeneity, the subtle relationship between immune cells and the inter-breed immune variation in pigs remains poorly characterized. Here, we generate single-cell transcriptomes …

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Single-Cell Transcriptomics
Full text 2026

The evolving role of OMICS in gastrointestinal tumor biology and clinical practice

Li Q, Zhang J, Chen J, et al.

Due to late diagnosis, high molecular diversity, and limited response to therapeutic intervention, gastrointestinal (GI) cancers result in a considerable number of cancer-related deaths. Classic clinicopathological classification and single omics analysis fail to adequately convey …

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Epigenetics Transcriptomics
Full text 2026

Multi-omics Approaches for Biomarker Discovery of Uterine Fibroids: A Systematic Review

Hussein F, Elamin O, Al-Hendy A, et al.

<h4>Introduction</h4>Uterine fibroids are the most common benign gynecological tumors, affecting up to 70-80% of women, yet still lack clinically validated biomarkers for disease stratification, monitoring, or therapeutic targeting. Advances in multi-omics technologies offer unprecedented opportunities …

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Epigenetics Transcriptomics
Full text 2026

Integrative Genomic Analysis Reveals Pseudouridine Modification-Related Gene Signatures Associated With Prognosis and Therapeutic Response Patterns in Hepatocellular Carcinoma

Gan Z, Fan T, Wang W, et al.

<h4>Background</h4>Hepatocellular carcinoma (HCC) is a genomically heterogeneous malignancy with substantial variability in prognosis and therapeutic response. Pseudouridine (<i>Ψ</i>) modification is an evolutionarily conserved RNA modification involved in RNA structure stabilization and translational regulation; however, the …

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Bioinformatics Transcriptomics
Full text 2026

Bridging Ancestry-Stratified Bias in Pharmacogenomics AI: Toward Metabolomics-Inclusive Multi-Omics Precision Medicine

Lee H, Sajid K, Lee D.

Pharmacogenomics AI offers significant potential for individualized drug therapy; however, its clinical benefits remain unevenly distributed. Models trained predominantly on European-ancestry data consistently underperform in non-European populations, with polygenic risk scores (PRS) showing an estimated …

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Bioinformatics Metagenomics Transcriptomics
Full text 2026

Deciphering the Heterogeneous Microenvironment of Head and Neck Squamous Cell Carcinoma Through an Integrated Immune Inflammation Framework

Li J, Sun S, Ji Z, et al.

<h4>Background</h4>Head and neck squamous cell carcinoma (HNSC) exhibits substantial prognostic and microenvironmental heterogeneity. However, the integrated prognostic relevance of synergistic immune and inflammatory signatures in HNSC remains fully elucidated.<h4>Methods</h4>Weighted gene coexpression network analysis (WGCNA) was …

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Bioinformatics Single-Cell Transcriptomics