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Haplotypes of polyploid organisms provide important insights into polyploid evolution and advanced breeding strategies. Significant challenges remain in polyploid haplotype phasing, including the great number of haplotype copies and the presence of haplotypes with high …
Read PDFWe report 10 assembled and annotated whole-genome sequences of <i>Lactiplantibacillus pentosus</i> isolated from Greek (<i>n</i> = 3) and Spanish (<i>n</i> = 7) commercial table olive fermentations. The number of contigs per genome sequence fluctuates between …
Read PDFWe present the draft genome sequence of <i>Aliihoeflea</i> strain PC F10.4, an alphaproteobacterium isolated from the surface of the red macroalga <i>Plocamium cartilagineum</i> collected at King George Island, Antarctica. The assembled genome is 4,743,656 bp …
Read PDFWe report the draft genome sequence of the extensively drug-resistant <i>Klebsiella pneumoniae</i> strain NGCE-700 isolated from a bacteremia patient in Bangladesh. The 5.53 Mb genome comprises nine contigs with N50 5.49 Mb and guanine or …
Read PDFWe report the draft genome sequence of <i>Lentzea</i> sp. H45, an extremotolerant actinobacterium from high-altitude Atacama Desert soil, producing anti-HIV-1 integrase lentzeosides. The genome comprises 8.7 Mbp with 70.9% GC content and harbors 34 biosynthetic …
Read PDF<i>Bacillus</i> species are recognized as effective biological agents for inhibiting pathogenic microorganisms and promoting plant growth in agricultural application<i>s</i>. We report the complete genome sequence of <i>Bacillus velezensis strain</i> F68, which was isolated from tomato …
Read PDFWe present the complete genome sequence of <i>Debaryomyces hansenii</i> DSM 3428, assembled using long- and short-read sequencing data. This genome provides a valuable reference for investigating the genetic basis of stress tolerance and biotechnologically relevant …
Read PDFWe determined the complete genome sequence of <i>Pseudomonas</i> sp. PAMC25886 from alpine glacier cryoconite. The genome comprises a single circular chromosome of 7,035,536 bp with 61.2% G + C content and 6,409 protein-coding genes. This …
Read PDF<i>Xanthomonas campestris</i> pv. <i>campestris</i> (NSTU_AG-1), the pathogen of black rot disease, was isolated from cabbage in Bangladesh. The genome size was 5,120,760 bp with guanine + cytosine (G + C) content of 64.98% and had …
Read PDFWe report the coding-complete genome sequence of a largemouth bass virus isolate obtained from diseased largemouth bass (<i>Micropterus salmoides</i>) in China. The genome is 99,378 bp in length with a GC content of 52.1% and …
Read PDFWe here present 27 closed genome sequences of clinical <i>Listeria monocytogenes</i> isolates representing 26 prevalent phylogenetic sub-lineages detected in Germany within recent years. This information may facilitate analysis of ongoing and future outbreaks and provides …
Read PDF<h4>Background/aim</h4>Prostate cancer (PCa) is a leading malignancy in men, and understanding its molecular mechanisms is crucial for advancing therapeutic strategies. Ubiquitination, a key post-translational modification, regulates protein degradation and signaling, playing a vital role in …
Read PDFThe length of the newly sequenced <i>Oxyartes lamellatus</i> was 16,291 bp, and it contained 13 protein-coding genes (PCGs), 2 ribosomal genes (rRNAs) and 22 transfer RNA genes (tRNAs). The AT content was rich, accounting for …
Read PDFThe escalating global demand for animal products-meat, milk, and eggs-requires sustained advances in the efficiency, sustainability, and biological performance of livestock production systems [...].
Read PDFPURPOSE: This study aimed to elucidate the genetic and clinical profiles of Chinese patients with microphthalmia harbouring PRSS56 variants and investigate the genotype‒phenotype correlation. METHODS: Whole-exome sequencing (WES) was performed in patients with microphthalmia and …
Read PDF<h4>Abstract</h4>Mantle cell lymphoma (MCL) is a biologically heterogeneous B-cell malignancy. Although genomics and transcriptomics have delineated parts of the MCL disease spectrum, proteomics remains largely unexplored. Here, we conducted a comprehensive proteogenomic analysis integrating genomics, …
Read PDF<i>Arthrobacter citreus</i> strain NJF-O2 was isolated from the distal colon of a healthy adult ram postmortem in Najaf Governorate, Iraq. We present the chromosome-scale scaffold genome sequence of this strain to expand <i>Arthrobacter</i> genomic resources …
Read PDFThis study presents the first comprehensive molecular assessment of the Lepidoptera fauna of Austria based on DNA barcodes (cytochrome <i>c</i> oxidase I, COI; 658 bp Folmer region). The barcode reference library comprises approximately 23,500 sequences, …
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