Draft genome sequences of <i>Alicyclobacillus</i> strains isolated from the Chinoike-Jigoku hot spring, Oita, Japan

The genus <i>Alicyclobacillus</i> is a thermoacidophilic bacterial genus found in diverse environments. Here, we report the draft genome sequence of <i>Alicyclobacillus</i> sp. strains CIJ1 and CIJ2 isolated from the Chinoike-Jigoku hot spring in Oita, Japan. Phylogenomic analyses suggest that these strains represent a candidate novel species within the genus.