Browse Papers

Search the literature by keyword, topic, or author. Filter to articles with full text available.

10021 results

Full text 2025

Identifying associations of de novo noncoding variants with autism through integration of gene expression, sequence, and sex information

Li R, Ernst J.

<h4>Background</h4>Whole-genome sequencing (WGS) data has facilitated genome-wide identification of rare noncoding variants. However, elucidating these variants' associations with complex diseases remains challenging. A previous study utilized a deep-learning-based framework and reported a significant brain-related association …

Read PDF
Epigenetics
Full text 2025

A Novel Integrative Framework for Depression: Combining Network Pharmacology, Artificial Intelligence, and Multi-Omics with a Focus on the Microbiota-Gut-Brain Axis

Zhang L, Chen K, Li S, et al.

Major Depressive Disorder (MDD) poses a significant global health burden, characterized by a complex and heterogeneous pathophysiology insufficiently targeted by conventional single-treatment approaches. This review presents an integrative framework incorporating network pharmacology, artificial intelligence (AI), …

Read PDF
Bioinformatics
Full text 2025

Advances in biomarkers for optic neuritis and neuromyelitis optica spectrum disorders: a multi-omics perspective

Liu L, Guo K, Yang D.

Optic neuritis (ON) and neuromyelitis optica spectrum disorders (NMOSD) are inflammatory neuro-ophthalmological conditions characterized by significant visual impairment and diverse clinical manifestations. Advances in diagnostic biomarkers have improved disease identification, including aquaporin-4 immunoglobulin G (AQP4-IgG) …

Read PDF
Bioinformatics
Full text 2025

Integrative Multi-Omics Approaches for Identifying and Characterizing Biological Elements in Crop Traits: Current Progress and Future Prospects

Fan BL, Chen LH, Chen LL, et al.

The advancement of multi-omics tools has revolutionized the study of complex biological systems, providing comprehensive insights into the molecular mechanisms underlying critical traits across various organisms. By integrating data from genomics, transcriptomics, metabolomics, and other …

Read PDF
Transcriptomics
Full text 2025

Assessment of peripheral blood DNA methylation signatures as pharmacodynamic and predictive biomarkers during azacitidine therapy in juvenile myelomonocytic leukaemia: Results of the EWOG-MESRAT study

Schönung M, Rathmann S, Ramamoorthy S, et al.

EWOG-MESRAT (European Working Group-Methylation Signatures and Response to Azacitidine Therapy; DRKS00007185) is an investigator-initiated trial that studied EPIC array-based DNA methylation patterns and next generation sequencing (NGS)-based variant allele frequencies (VAFs) of driver mutations in …

Read PDF
Epigenetics
Full text 2025

Multi-omic insights of preeclampsia and cardiovascular health outcomes

Giesen EM, Verlohren S, Blois SM.

Preeclampsia is a complex, hypertensive pregnancy disorder which is linked to an increased cardiovascular disease risk in both mothers and their offspring. Maternal haemodynamic adaptation during gestation is essential for adequate foetal nutrient supply and …

Read PDF
Epigenetics Transcriptomics