Browse Papers

Search the literature by keyword, topic, or author. Filter to articles with full text available.

10297 results

Full text 2026

Multi-omics single-cell dissection of malignant epithelial heterogeneity identifies GJB2 as an EMT-driving biomarker in triple-negative breast cancer

Xu H, Zhang C, Zhang X, et al.

BACKGROUND: Tumor heterogeneity poses a major challenge to elucidating the mechanisms underlying tumor progression and metastasis. However, the cellular heterogeneity of triple-negative breast cancer (TNBC) remains incompletely understood. METHODS: We performed an integrated analysis of …

Read PDF
Single-Cell Transcriptomics
Full text 2026

Ten common mistakes that could ruin your enrichment analysis

Bora A, McKenzie M, Ziemann M.

Functional enrichment analysis (FEA) is an incredibly powerful way to summarise complex genomics data into information about the regulation of biological pathways including cellular metabolism, signalling and immune responses. About 10,000 scientific articles describe using …

Read PDF
Bioinformatics
Full text 2026

Prophage diversity in poultry-associated <i>Salmonella enterica</i> from Ecuador: a case study using an <i>in-silico</i> terminase-based approach

Quelal-Madrid F, Armijos CE, Vinueza-Burgos C, et al.

Prophages can constitute up to 30% of the accessory genome in <i>Salmonella</i> enterica, acting as major drivers of virulence evolution and antimicrobial resistance; however, their diversity and functional contribution in Ecuadorian poultry-associated lineages remain unexplored. …

Read PDF
Epigenetics
Full text 2026

Palmitoylation remodeling dictates HCC heterogeneity: implications for subtype-specific prognostication and targeting the YAP-RhoA axis

Xu B, Dai J, Chen Z.

Palmitoylation, a critical post-translational modification mechanism, plays a pivotal role in hepatocellular carcinoma (HCC) tumorigenesis and progression. While multiple palmitoylated proteins have been reported to regulate HCC development, systematic characterization of palmitoylation-associated gene signatures and …

Read PDF
Transcriptomics
Full text 2026

Evaluating an Innovative Oncology Education Initiative: Integrating Genomics and Histopathology in a Virtual Laboratory e-Learning Resource to Enhance Learner Engagement

Reed KR, Crawford OJ, West HD, et al.

Advances in genomics have transformed histopathology, especially in oncology teaching. Histopathologists traditionally assess tissue morphology, but now integrate genomic data to enhance diagnostic accuracy and treatment precision. Students must grasp both disciplines and appreciate the …

Read PDF
Bioinformatics
Full text 2026

Draft genome sequence of &lt;i&gt;Limosilactobacillus fermentum&lt;/i&gt; PJG11 isolated from wild yam, &lt;i&gt;Dioscorea luzonensis&lt;/i&gt; in Ilocos Norte, Philippines

Agcaoili MJT, Balloyan LR, Fabia JZ, et al.

This report presents the draft genome sequence of a lactic acid bacterium, <i>Limosilactobacillus fermentum</i> PJG11, isolated from wild yam, <i>Dioscorea luzonensis</i>, an endemic root crop in Ilocos Norte, Philippines. The discovered genomic characteristics of the …

Read PDF
Bioinformatics