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Full text 2026

De novo genome assembly and annotation of Gnathostoma spinigerum

González-Bertolín B, Monzón S, Zaballos Á, et al.

<h4>Background</h4>Gnathostoma spinigerum is a parasitic nematode implicated in human cases of eosinophilic meningitis. This species is primarily endemic to Thailand and frequently occurs in other regions as imported cases. Although this parasite poses a significant …

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Genome Assembly
Full text 2026

&lt;i&gt;StrainCascade&lt;/i&gt;: An automated, modular workflow for high-throughput long-read bacterial genome reconstruction and characterization

Jordi SBU, Baertschi I, Li J, et al.

Long-read sequencing offers unprecedented opportunities for high-resolution bacterial genome reconstruction, yet fragmented bioinformatics workflows hinder biological insights. <i>StrainCascade</i> addresses this gap by providing a fully automated, modular pipeline that integrates genome assembly, accurate annotation, and …

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Bioinformatics Genome Assembly Nanopore Sequencing