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Differences in gut microbiota composition related to diet have been reported in horses, but characterization of specific microbial taxa remains limited, particularly at the species level. The objective of this study was to use long-read …
Read PDF<i>Staphylococcus aureus</i>, a common member of the healthy human microbiota, is an opportunistic pathogen. To investigate the genomic features of this species in healthy individuals, we present the draft genome sequence of <i>S. aureus</i> N208, …
Read PDFThe female urinary tract is host to several different <i>Staphylococcus</i> species, both uropathogens and commensals. To further investigate these species, we sequenced the genomes of four isolates from voided urine samples collected from asymptomatic ("healthy") …
Read PDFWe present the draft genome sequences of <i>Lactiplantibacillus plantarum</i> strains KABP062 and KABP063, two fecal isolates with probiotic potential.
Read PDF<h4>Motivation</h4>Efficient and collision-free hashing of DNA sequences is essential for accuracy and performance in bioinformatics applications such as genome assembly, sequence alignment, and metagenomic classification. Traditional hashing methods often result in collisions, impacting the precision …
Read PDFWe present a genome assembly from a specimen of <i>Trididemnum clinides</i> (photosymbiotic ascidian; Chordata; Ascidiacea; Aplousobranchia; Didemnidae). The <i>T. clinides</i> genome sequence has a total length of 906.92 megabases. Most of the assembly (97.83%) is …
Read PDFWe present a genome assembly from a specimen of <i>Corticium candelabrum</i> (sponge; Porifera; Homoscleromorpha; Homosclerophorida; Plakinidae). The genome sequence has a total length of 185.49 megabases. Most of the assembly (99.4%) is scaffolded into 22 …
Read PDFClinical laboratories are increasingly using diagnostic tests directly on positive blood cultures, which may lead to fewer attempts to recover bacterial isolates. Consequently, public health laboratories can benefit from assays that directly process blood culture …
Read PDFThe rise in antimicrobial resistance (AMR) is a severe public health threat worldwide. India bears a disproportionately heavy burden of this problem due to ample antimicrobial usage in both humans and animals and scarce integrated …
Read PDFAs symbiotic complexes formed through the association of bacteria or algae with fungi, lichens exhibit exceptional adaptability to extreme environments and function as pioneer species in rocky habitat ecological succession. The absence of high quality …
Read PDFWe present a genome assembly from an individual <i>Anodontia alba</i> (buttercup lucine; Mollusca; Bivalvia; Lucinida; Lucinidae). The genome sequence has a total length of 1 862.85 megabases. Most of the assembly (99.28%) is scaffolded into …
Read PDFNanopore sequencing is a powerful tool for real-time pathogen detection and genomic characterization; however, its application to individual ticks is limited by abundant host-derived nucleic acids and low viral RNA levels. In this study, we …
Read PDFWe report a 1.8 Mb draft genome of <i>Alloscardovia omnicolens</i> Y28 isolated from a patient with endometrial cancer.
Read PDFWe present a genome assembly from an individual <i>Lycopodina hypogea</i> (carnivorous sponge; Porifera; Demospongiae; Poecilosclerida; Cladorhizidae). The genome sequence has a total length of 235.10 megabases. Most of the assembly (98.85%) is scaffolded into 15 …
Read PDFWe present a genome assembly from an individual <i>Lamellibrachia columna</i> (tubeworm; Annelida; Polychaeta; Sabellida; Siboglinidae). The genome sequence has a total length of 879.73 megabases. Most of the assembly (99.96%) is scaffolded into 15 chromosomal …
Read PDFWe present a genome assembly from a specimen of <i>Phakellia ventilabrum</i> (Porifera; Demospongiae; Bubarida; Bubaridae). The genome sequence has a total length of 211.92 megabases. Most of the assembly (99.97%) is scaffolded into 25 chromosomal …
Read PDFWe present a genome assembly from an individual <i>Aurelia</i> sp. 4 Dawson <i>et al</i>., 2005 (moon jellyfish; Cnidaria; Scyphozoa; Semaeostomeae; Ulmaridae). The genome sequence has a total length of 462.10 megabases. Most of the assembly …
Read PDFSpondyloarthritis (SpA) and psoriatic arthritis (PsA) are interrelated, immune-mediated inflammatory diseases characterized by significant clinical heterogeneity. Early differential diagnosis, accurate disease activity assessment, and the development of personalized treatment strategies remain significant clinical challenges. Single-omics …
Read PDFDespite recent advances, the underlying mechanisms of the development and progression of many chronic respiratory diseases remain to be elucidated. Factors such as heterogeneity and complexity of human diseases and difficulty interpreting large datasets hinder …
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