Search the literature by keyword, topic, or author. Filter to articles with full text available.
3689 results
We hereby report the draft genome sequence of <i>Rhodococcus erythropolis</i> DR10, an actinobacterium isolated from the soil of Ladakh via minimal media agar. The genome 6,395,202 bp exhibited a 62.5% GC content with 5,883 coding …
Read PDFFish nocardiosis, caused by <i>Nocardia seriolae</i>, poses a persistent threat to the aquaculture industry. Yet, the genomic determinants underlying strain-level diversity and adaptation remain poorly understood due to the high nucleotide conservation of this species. …
Read PDFThe advent of affordable whole-genome sequencing has spurred numerous large-scale projects aimed at inferring the tree of life, yet achieving a complete species-level phylogeny remains a distant goal due to significant costs and computational demands. …
Read PDF<i>Bacillus amyloliquefaciens</i> COFCAU_P1, an autochthonous probiotic from <i>Labeo rohita</i>, was genome sequenced (Illumina NovaSeq; GenBank JBHEQH000000000). Its 4.09 Mb genome encodes 4,351 genes linked to stress tolerance, nutrient utilization, antimicrobial defense, enzymes, and immunomodulation. Phylogenomics …
Read PDFWe present the complete mitochondrial genome of <i>Stonychophora maculata</i> from Malaysia, which is a circular DNA molecule with a total length of 15,956 bp and is AT-rich (74%). It contains 37 mitochondrial genes, including 13 …
Read PDFBees are fundamental factors in ecology and agriculture due to their ecosystem services as pollinators, including many important crops. Because of its ecological significance and value to humans, the honey bee, Apis mellifera, was one …
Read PDFA strain from the <i>Bacillus</i> group isolated from rice that produced excessive biofilm on glass was identified as <i>Bacillus pacificus</i>. This strain has operons related to biofilm production in <i>Bacillus cereus</i>, such as sipW-tasA-calY and …
Read PDFSubstitution model selection is central to phylogenetic inference and is commonly treated as a problem of identifying the substitutional complexity required to describe sequence evolution along a single tree. This framework implicitly assumes a shared …
Read PDF<h4>Premise</h4>The species-rich flora of Tropical Andes underwent multiple rapid and recent diversifications, yet resolving their evolutionary histories remains challenging despite increasing phylogenomic data. Here, we examined phylogenomic conflict in Brachyotum (Melastomataceae) to identify sources preventing …
Read PDFIn the genomic era, phylogenomics is playing an increasingly important role in biological control research for prioritising species in host specificity testing, species delimitation, and elucidating the origins of introduced species. This paper outlines key …
Read PDF[This corrects the article DOI: 10.1111/eva.70132.].
Read PDFNo abstract available.
Read PDFPhylogenomics pipelines are designed to reconstruct evolutionary relationships among groups of organisms. Existing pipelines are dependent upon reference gene sets for which target copies may be retrieved through read-mapping. This read-mapping approach is limited by …
Read PDFBoth protein O-GlcNAcylation and N-glycosylation are extremely important in human cells and regulate many cellular events. While O-GlcNAcylation is known to act as a stress sensor, its changes in human cells with N-glycosylation perturbations remain …
Read PDFAtypical Parkinsonisms are a diverse group of diseases associated with multiple pathologies, including synucleinopathies and tauopathies. Atypical Parkinsonisms include progressive supranuclear palsy, corticobasal degeneration, multiple system atrophy, and dementia with Lewy bodies. The examination of …
Read PDF