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GEMS: A Genomic Evidence Management Framework for Regulatory Decision-Making

Jose Carlo Sia, Lazaro Abrenica, Roland Francis Quiaño, et al.

GEMS presents a framework for transforming genomic observations into traceable, reproducible, and auditable evidence for regulatory decision-making. It defines an eleven-stage lifecycle, six evidentiary pillars, and the Genomic Evidence Standard (GES), demonstrated through a portable …

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Bioinformatics
Full text 2026

Blood-Based Circulating Tumor DNA Assays for Early Colorectal Cancer Detection: A Systematic Review of Performance in Asymptomatic Screening Populations

Kahn CL, Rasmussen MW, Kleif J, et al.

Early detection of colorectal cancer (CRC) via population-based screening programs can reduce incidence and mortality. Current screening approaches are limited by cost, accessibility, compliance, and colonoscopy capacity. Blood-based screening of circulating tumor (ct) DNA may …

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Bioinformatics
Full text 2025

VaccineDesigner: A Web-Based Tool for Streamlined Multi-Epitope Vaccine Design

Trygoniaris D, Korda A, Paraskeva A, et al.

<h4>Background</h4>Multi-epitope vaccines have become the preferred strategy for protection against infectious diseases by integrating multiple MHC-restricted T-cell and B-cell epitopes that elicit both humoral and cellular immune responses against pathogens. Computational methods address various aspects …

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Bioinformatics
Full text 2025

Precision Nursing: advances and challenges in implementation

Lopes-Júnior LC.

(1) Precision Nursing (PN) emerges as an innovative field within Nursing. (2) PN represents the shift from standardized care to a highly tailored approach. (3) Nursing is strategically positioned to lead the translation of these …

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Bioinformatics
Full text 2026

Tfh Cells in Henoch-Schönlein Purpura (IgA Vasculitis): Current Concept

Huang J, Liu J, Hu Y, et al.

Henoch-Schönlein purpura (HSP) is an inflammatory condition affecting the small blood vessels, leading to organ damage and symptoms across various body systems, including skin, joints, and kidneys. The disease's pathogenesis involves the deposition of immunoglobulin …

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Bioinformatics
Full text 2025

Role of Histone Lactylation in Neurological Disorders

Zhang YM, Yang F, Li Q, et al.

Lactate is not only the end product of glycolysis but also plays a key role in epigenetic regulation. Recently, lactate-derived histone lactylation has been identified as a novel epigenetic modification that can directly influence gene …

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Bioinformatics
Full text 2026

Mesothelin/Mucin 16 Signaling in Activated Portal Fibroblasts Drives the Development of Cholestatic Fibrosis and Hepatocellular Carcinoma in Aged Female Multidrug Resistance Protein 2 Knockout Mice

Sakane S, Nishio T, Fuji H, et al.

<h4>Background & aims</h4>The contribution of activated hepatic stellate cells (aHSCs) to cholestatic fibrosis and cancer is well-documented, but the role of portal fibroblasts (PFs), and especially mesothelin (Msln)-mucin 16 (Muc16)- Thy-1 cell surface antigen (Thy-1) …

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Bioinformatics
Full text 2025

Report of the 47th annual conference and the golden jubilee year meeting of the Environmental Mutagen Society of India (EMSI) and international conference on environmental and molecular mutagenesis: genomic integrity and implication to human health, Tamil Nadu, India, January 29-31, 2025

Ganguly BB.

The 47th Annual Conference and the Golden Jubilee Year Meeting of the Environmental Mutagen Society of India (EMSI) and International Conference on Environmental and Molecular Mutagenesis: Genomic Integrity and Implication to Human Health was held …

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Bioinformatics
Full text 2025

IceQream: Quantitative chromosome accessibility analysis using physical TF models

Bercovich A, Lifshitz A, Eldar M, et al.

Single-cell mapping of chromosomal accessibility patterns has recently led to improved predictive modelling of epigenomic activity from sequence. However, quantitative models explaining the epigenome using directly interpretable components are still lacking. Here we develop IceQream …

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Bioinformatics Epigenetics Single-Cell